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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015901949.1_cds_XP_016451979.1_46269
CDS Infomation

[gene=LOC107776580] [db_xref=GeneID:107776580] [protein=DNA excision repair protein ERCC-1-like] [protein_id=XP_016451979.1] [location=join(50348..50604,50731..50827,51867..51970,52244..52343,52437..52513,52769..52868,53042..53113,53196..53264,53881..54204)] [gbkey=CDS]
Sequence

ATGGAAGGCGAAGAGCAGGAAGGAGGAGCAGAGAAGAAGAAGAGCTTTGTGATACAGATA
CCTTCTTACGAAGAAGTAATGGAGAGTTCTCAGCCCAAAACGACGCCGTCTTCTCTCTTC
AACCCTACCCCTTCTTTCACTCAAGCCTTCAAATTCGTCAAAAACTCCGAATTCTACTCC
CCACCTCCACGTCCTCCTCCGGCTCAGCCTTCTTCTTCTTCTTCTTCCCCTTCCCCCTCC
CAAACCGCCAATATCAGACCAACTAATAATTCAGACGTTCCCACATCATCATCACCATCG
TCCACGCCCTCAACTTCAGCTAATCGAAATGCTATACTTGTGAGTCATAGACAGAAGGGC
AATCCGTTGCTAAAACATATCAGGAATGTGAGGTGGGCTTTTGCAGATATTGTTTGTGAC
TACTTATTGGGCCAGAACACTTGTGCTCTTTATTTAAGCCTCCGGTATCATCTGCTTCAT
CCAGACTACTTGTATTTCCGGATAAGAGAATTGCAGAAGAACTTTAGGCTCCGCATAGTT
TTGTGCCATGTTGATGTCGAAGATGTGGTCAAGCCTTTACTTGAAGTTACCAGAACTTCA
CTCCTTCATGATTGCACTCTGTTATGTGGTTGGAGTTTGGAAGAATGCGGACGGTACTTG
GAGACGGTAAAGGTTTATGAAAATAAGCCCGCTGATCTCATTCAGGGCCAACTGGATGCA
GACTACCTATCACGGCTGAATCATGCTCTCACAGCAGTAAGACATGTTAACAAAACAGAT
GTTGTGACTCTTGGCTCGACATTTGGGTCTCTTTCTCATGTTATGGATGCATCTATGGAA
GATCTTGCTCGATGCCCTGGCATAGGAGAGCGCAAGGTAAAACGCCTGTACGACACTTTT
CATGAACCTTTCAAACGAGAAGTGCCAAAACGGCAATGTGTTCCAGAAACTTCAGTTGCT
AATGAATCTCATCCTGGCTCCAGCAGCACAAGGGAGGATGAGAAGGAAGTTGGGGATACA
AGCAATTGTGAGAAGAAAGAAAACGAACTAACTGTCAAGTCAGCACTTTCTGCTGCTTTT
GCTAAGTACTCACACAAAGTTGCCAGAAAAAAGAATAAATCACAAGTAGAGGAAGAAGGG
AAATGCAGTGCTAATGAAGAAACTAAAACTGGTGATACAAATGGCAGCAACACCACCTGA

Peptide Sequence

PEP ID

XP_016451979.1
PEP Infomation

PREDICTED: DNA excision repair protein ERCC-1-like [Nicotiana tabacum]
Sequence

MEGEEQEGGAEKKKSFVIQIPSYEEVMESSQPKTTPSSLFNPTPSFTQAFKFVKNSEFYS
PPPRPPPAQPSSSSSSPSPSQTANIRPTNNSDVPTSSSPSSTPSTSANRNAILVSHRQKG
NPLLKHIRNVRWAFADIVCDYLLGQNTCALYLSLRYHLLHPDYLYFRIRELQKNFRLRIV
LCHVDVEDVVKPLLEVTRTSLLHDCTLLCGWSLEECGRYLETVKVYENKPADLIQGQLDA
DYLSRLNHALTAVRHVNKTDVVTLGSTFGSLSHVMDASMEDLARCPGIGERKVKRLYDTF
HEPFKREVPKRQCVPETSVANESHPGSSSTREDEKEVGDTSNCEKKENELTVKSALSAAF
AKYSHKVARKKNKSQVEEEGKCSANEETKTGDTNGSNTT

Transcript Sequence

Gene sequence data has not been registered.